Source code for isocor.tests.test_all_cases

"""Test the entire correction process at low- and high-resolution to cover all the situations that can be encountered.

This aims to verify that no error will be raised during normal usage.
This set of tests correct a measurement vector (set to unity, i.e. [1,1,1,1]
for a compound with 3 atoms of the tracer element) in all the possible combinations of the following situations:

* formulas: C1, C2, O1, O2, O3P3N3H3C3
* tracer elements: 13C, 17O, 18O
* derivative: H, H2, O, O2
* purity: 100%
* resolution (for high-resolution correction only): 10000, 100000, 1000000
* correct NA: True, False

Total number of tests: 240
"""

import numpy as np
import pytest
import isocor as hrcor


[docs]@pytest.mark.parametrize("data", [{"formula": "C1", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H2", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C1", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "C2", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "17O", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0, 0.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O1", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O2", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "O", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, 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"derivative_formula": "H", "tracer": "18O", "correct_NA_tracer": True, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H", "tracer": "18O", "correct_NA_tracer": False, "tracer_purity": [0.0, 0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": True, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 10000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 100000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}, {"formula": "O3P3N3H3C3", "resolution_at_400": 1000000, "derivative_formula": "H", "tracer": "13C", "correct_NA_tracer": False, "tracer_purity": [0.0, 1.0]}]) def test_correction_process_misc(data, data_iso): """Tests the entire correction process at high resolution. Combination of all the following situations: - formulas: O3P3N3H3C3, C1, O1, O2, C2, O1 - tracer elements: 13C (2 isotopes), 17O (3 isotopes), 18O (3 isotopes) - derivative: H, H2, O, O2 - purity: 100% - resolution: 10000, 100000, 1000000 - correct NA: True, False Total number of tests: 240 """ formula = data["formula"] derivative_formula = data["derivative_formula"] # Perform correction hr_metabolite = hrcor.HighResMetaboliteCorrector(formula, data["tracer"], data_isotopes=data_iso, resolution=data["resolution_at_400"], resolution_formula_code="orbitrap", mz_of_resolution=400, derivative_formula=derivative_formula, correct_NA_tracer=data["correct_NA_tracer"], tracer_purity=data["tracer_purity"], charge=1) lr_metabolite = hrcor.LowResMetaboliteCorrector(formula, data["tracer"], data_isotopes=data_iso, correct_NA_tracer=data["correct_NA_tracer"], derivative_formula=derivative_formula, tracer_purity=data["tracer_purity"]) tracer_element = data["tracer"][2] v_measured = [1] * (hr_metabolite.formula[tracer_element] + 1) _, v_corrected_hr, _, _ = hr_metabolite.correct(v_measured) _, v_corrected_lr, _, _ = lr_metabolite.correct(v_measured)